BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016D09LP1|AL427008
(910 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1766 1765 0.0
>3x_Contig1766
Length = 23951
Score = 1765 bits (888), Expect = 0.0
Identities = 906/912 (99%), Gaps = 2/912 (0%)
Strand = Plus / Minus
Query: 1 gatcttggttaattccttttcaggtttagtatggaaccgagcaaatattggcttcaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5164 gatcttggttaattccttttcaggtttagtatggaaccgagcaaatattggcttcaaata 5105
Query: 61 ttcgatccaattgcgtgccacctccacgttcaactcttctggctcatgacagaagaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5104 ttcgatccaattgcgtgccacctccacgttcaactcttctggctcatgacagaagaaatt 5045
Query: 121 gacctgaaatggactcttggttagcttctgcgtcgcaattatggcgtttcttgctttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5044 gacctgaaatggactcttggttagcttctgcgtcgcaattatggcgtttcttgctttttc 4985
Query: 181 gacagaacttgctccaagtccaagcgatcctaaaccaccagaattagatacagctgctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4984 gacagaacttgctccaagtccaagcgatcctaaaccaccagaattagatacagctgctgc 4925
Query: 241 caattccggtgtggatactccggccattggtgctactagaataggatacttgatccccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4924 caattccggtgtggatactccggccattggtgctactagaataggatacttgatccccag 4865
Query: 301 aatttcggttaaagctttcttggttgacattacaaagtacccgtggttgtgctagctctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4864 aatttcggttaaagctttcttggttgacattacaaagtacccgtggttgtgctagctctc 4805
Query: 361 gaccttggactaattgcgaataattacaccattattcatgaactccgcggagatatagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4804 gaccttggactaattgcgaataattacaccattattcatgaactccgcggagatatagat 4745
Query: 421 aataataacatgtttgcgtattcaattacatctggggatacttaaaagaaattactggag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4744 aataataacatgtttgcgtattcaattacatctggggatacttaaaagaaattactggag 4685
Query: 481 acatgaatcgcttttgccttttttcctgttacaagcctttgaataaaaaccgatccagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4684 acatgaatcgcttttgccttttttcctgttacaagcctttgaataaaaaccgatccagtt 4625
Query: 541 cgagatktaaggaattcaaaaacaataacaaaggaatatctaggtcgatacatgcagaga 600
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4624 cgagatttaaggaattcaaaaacaataacaaaggaatatctaggtcgatacatgcagaga 4565
Query: 601 agtaacgtaggtctccaggcttagattggaagtactcccgatcgcttagttcactgattt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4564 agtaacgtaggtctccaggcttagattggaagtactcccgatcgcttagttcactgattt 4505
Query: 661 tattgagtwagaaggcatctataacaattttagtataggaacgttccaccttttacatcc 720
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4504 tattgagtaagaaggcatctataacaattttagtataggaacgttccaccttttacatcc 4445
Query: 721 tatgctaacagatctgttctctgcactgttctcaattgaagatggaacaacagagtcagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4444 tatgctaacagatctgttctctgcactgttctcaattgaagatggaacaacagagtcagt 4385
Query: 781 gactcc-aaaatatggacatggcgt-caggragacgatatagatcttcaattaagggcac 838
|||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 4384 gactccaaaaatatggacatggcgtccaggaagacgatatagatcttcaattaagggcac 4325
Query: 839 ttatatactgctatcaaaggctcaaggtaaaggrgatgagcccattctatccggttgatt 898
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4324 ttatatactgctatcaaaggctcaaggtaaaggagatgagcccattctatccggttgatt 4265
Query: 899 ctacaactgagg 910
||||||||||||
Sbjct: 4264 ctacaactgagg 4253
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6041
Number of Sequences: 1807
Number of extensions: 6041
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)